eThread Webserver

eThread is a template-based protein structure prediction approach. Template structures are selected from the PDB library using meta-threading that combines ten individual threading/fold recognition algorithms.
If you use eThread, please cite the following papers:

eThread is also available as a standalone software distribution. Datasets are available for download from here. See the manual for the details on the output file format.

eThread uses CSI-BLAST, COMPASS, DFIRE, DSSP, fr-TM-align, HHpred, HMMER, Jackal, LIBSVM, MaxCluster, Modeller, NCBI BLAST, pftools, pGenTHREADER, PROCHECK, PSIPRED, Pulchra, SAM-T2K, SP3, Sparks, Stride, SVMrank, TASSER-Lite, THREADER and TM-score.

eThread is free of charge under the terms of GNU General Public License for non-commercial use. It is distributed without any warranty, but with best wishes.

This server is running eThread v2.0. Click here to see some sample results.


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Target sequence in FASTA format, single chain 50-999 residues.


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© Michal Brylinski
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