When viewing the results, activating Java supported features jams the browser.

Although we tested the Java applet used to visualize the results for eThread and eFindSite across several platforms, operating systems and web browsers, users may still experience some issues. If problems with Java supported features persist, please try to clean cache or use "no Java" link when clicking on "View results". We will continue working on the web interface to improve the visual components of our services.

eMatchSite Webserver

eMatchSite is a sequence order-independent algorithm for ligand binding site alignment and matching. It accurately identifies pairs of pockets that bind similar compounds even in proteins with different global structures.
If you use eMatchSite, please cite the following papers:

eMatchSite is also available as a standalone software distribution. Datasets are available for download from here. See the manual for the details on the output file format.

eMatchSite is free of charge under the terms of GNU General Public License for the general public and under a dual license for commercial users.

This server is running eMatchSite v1.0. Click here to see some sample results.

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© Michal Brylinski
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